Optimal Feature Combination for Multi-Modality Clustering — Find.OptClusterFeatures • MOFSR

Selects optimal feature combinations for multi-modality clustering analysis.

Usage

Find.OptClusterFeatures(
  data_layers,
  feature_subset_sizes,
  try_num_clusters = 2:6,
  n_runs = 5,
  n_fold = 5
)

Arguments

data_layers: A named list of matrices (features x samples).
feature_subset_sizes: A list of sequences for feature subset sizes.
try_num_clusters: Integer vector. Cluster numbers to test (default: 2:6).
n_runs: Integer. NMF iterations (default: 5).
n_fold: Integer. Cross-validation folds (default: 5).

Value

A list with optimal_combination and all_results.

Author

Zaoqu Liu; Email: liuzaoqu@163.com