Performs factor analysis based clustering on multi-omics data.
Uses multi-view factor analysis to extract latent factors, then clusters
samples based on these factors. For full MOFA, use MOFA2 package.
Usage
run_mofa(data, n_clusters, n_factors = 10, cluster_method = "ward.D2")
Arguments
- data
List of matrices (features x samples).
- n_clusters
Number of clusters.
- n_factors
Number of factors (default: 10).
- cluster_method
Clustering method (default: "ward.D2").
Value
Data frame with sample IDs and cluster assignments.