Load a pre-trained model and make predictions on new bulk data.
Usage
QuickPredict(model_path, bulk_data, output_file = NULL, verbose = TRUE)
Arguments
- model_path
Character. Path to saved model directory.
- bulk_data
Matrix or file path to bulk RNA-seq data.
- output_file
Character. Path to save predictions. Default is NULL.
- verbose
Logical. Print progress. Default is TRUE.
Value
Data frame of predicted cell fractions.
Examples
if (FALSE) { # \dontrun{
predictions <- QuickPredict(
model_path = "trained_model",
bulk_data = "bulk_expression.txt",
output_file = "predictions.txt"
)
} # }