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hdWGCNA 0.5.00

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- ━━━━━━━━━━ Getting Started ━━━━━━━━━━
- Introduction to hdWGCNA
- Quick Start Guide
- Algorithm and Mathematical Framework
- ━━━━━━━━━━ Core Tutorials ━━━━━━━━━━
- hdWGCNA in single-cell data
- hdWGCNA in spatial transcriptomics data
- Isoform co-expression network analysis
- Network visualization
- ━━━━━━━━━━ Biological Context ━━━━━━━━━━
- Differential module eigengene (DME) analysis
- Module trait correlation
- Enrichment analysis
- ━━━━━━━━━━ Cross-Dataset Analysis ━━━━━━━━━━
- Projecting modules to new datasets
- Module preservation and reproducibility
- Cross-species and cross-modality analysis
- ━━━━━━━━━━ Advanced Topics ━━━━━━━━━━
- Transcription factor network analysis
- PPI network integration
- Consensus network analysis
- Pseudobulk analysis
- Pseudotime dynamics
- Motif analysis
- ━━━━━━━━━━ Other ━━━━━━━━━━
- Module customization
- Alternative metacell algorithms
- Using SCTransform data
- All vignettes
Reference
News

CheckWGCNAName

Source: R/getters_and_setters.R

CheckWGCNAName.Rd

CheckWGCNAName

Usage

CheckWGCNAName(seurat_obj, wgcna_name)

Arguments

seurat_obj: A Seurat object

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Developed by Zaoqu Liu.

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