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Extract feature matrix from Seurat (exported helper)

Source: R/seurat_integration.R
GetExpressionMatrix.Rd

Helper function to extract feature matrix with V4/V5 compatibility

Usage

GetExpressionMatrix(object, assay = NULL, slot = "data", features = NULL)

Arguments

object

Seurat object

assay

Assay name

slot

Slot name: "data", "counts", "scale.data"

features

Features to extract

Value

Matrix (cells x features)