Plot confusion matrix heatmap — plot_confusion_heatmap • scClustEval

Visualize confusion matrix as a heatmap

Usage

plot_confusion_heatmap(
  result,
  normalized = "R1",
  title = NULL,
  colors = c("white", "gray20"),
  show_values = TRUE,
  text_size = 3
)

Arguments

result: scClustEval result object, or a confusion matrix directly
normalized: Which matrix to plot: "raw", "R1", or "R2"
title: Plot title
colors: Color gradient (low to high)
show_values: Show values in cells
text_size: Size of text in cells

Value

A ggplot2 object