Gene set to score for the CytoSig or the Reactome databases.

Returns the names of the cytokines supported by either the CytoSig or the Reactome databases.

Usage

supportedCytokines(database = "cytosig")

Arguments

database

Database used for gene set construction and set scoring. * "cytosig" returns the 41 cytokines scored using the CytoSig database. * "reactome" returns the 30 cytokines scored using the Reactome database.

Value

List of cytokines associated with the CytoSig or the Reactome databases.

Examples

supportedCytokines(database = "cytosig")
#>  [1] "ActivinA" "BDNF"     "BMP2"     "BMP4"     "BMP6"     "CD40LG"  
#>  [7] "CXCL12"   "EGF"      "FGF2"     "GCSF"     "GDF11"    "GMCSF"   
#> [13] "HGF"      "IFNG"     "IFNL"     "IL10"     "IL12"     "IL13"    
#> [19] "IL15"     "IL17A"    "IL1A"     "IL1B"     "IL2"      "IL21"    
#> [25] "IL22"     "IL27"     "IL3"      "IL4"      "IL6"      "LIF"     
#> [31] "LTA"      "MCSF"     "NO"       "OSM"      "TGFB1"    "TGFB3"   
#> [37] "TNFA"     "TNFSF12"  "TRAIL"    "VEGFA"    "WNT3A"   
supportedCytokines(database = "reactome")
#>  [1] "BDNF"    "BMP2"    "BMP4"    "BMP6"    "CD40LG"  "CXCL12"  "EGF"    
#>  [8] "FGF2"    "HGF"     "IFNG"    "IL10"    "IL13"    "IL15"    "IL17A"  
#> [15] "IL1A"    "IL1B"    "IL2"     "IL21"    "IL22"    "IL27"    "IL3"    
#> [22] "IL4"     "IL6"     "LIF"     "OSM"     "TGFB1"   "TGFB3"   "TNFSF12"
#> [29] "VEGFA"   "WNT3A"