Compute null distribution of mean expression per cluster
Usage
calculate_cluster_mean_distribution(
counts_dt,
labels_dt,
n_fft = NULL,
mode = "continuous",
parallel = FALSE,
n_cores = NULL
)Arguments
- counts_dt
data.table of expression (cells x genes)
- labels_dt
data.table with cell_type column
- n_fft
Maximum n for exact convolution. NULL = auto (30 for continuous, 100 for digit)
- mode
Distribution mode ("continuous" or "digit")
- parallel
Whether to use parallel computation
- n_cores
Number of cores for parallel