Compute p-values for L-R interactions
Usage
calculate_interactions_pvalue(
mean_pmf_dt,
interactions,
interactions_strength,
percents_analysis,
method = "Arithmetic",
parallel = FALSE,
n_cores = NULL
)Arguments
- mean_pmf_dt
data.table of cluster distributions (clusters x genes)
- interactions
data.table of interactions
- interactions_strength
data.table of interaction strengths
- percents_analysis
data.table of logical (passes threshold)
- method
"Arithmetic" or "Geometric"
- parallel
Whether to use parallel processing (reserved for future)
- n_cores
Number of cores for parallel processing (reserved for future)