Calculate L-R interaction strengths for all cell type pairs
Usage
calculate_interactions_strength(
mean_counts,
interactions,
method = "Arithmetic",
sep = "|"
)
Arguments
- mean_counts
data.table of mean expression (clusters x genes)
- interactions
data.table of interactions
- method
"Arithmetic" or "Geometric"
- sep
Separator for cell type pair names
Value
data.table (cell type pairs x interactions)
