Filter Edges — FilterEdges • NOVA

Filter edges based on expression and specificity thresholds.

Usage

FilterEdges(nova_result, min_expr = 0, min_pct = 0, min_spec = 0, top_n = 0)

Arguments

nova_result: NOVAResult object from ExtractEdges
min_expr: Minimum mean expression threshold for ligand/receptor
min_pct: Minimum detection rate (proportion of expressing cells)
min_spec: Minimum specificity threshold
top_n: Keep only top N edges by specificity (0 = all)

Value

Filtered NOVAResult object

Examples

if (FALSE) { # \dontrun{
# Filter by detection rate
filtered <- FilterEdges(result, min_pct = 0.2)

# Filter and keep top 1000
filtered <- FilterEdges(result, min_pct = 0.1, min_spec = 0.01, top_n = 1000)
} # }