Random walk on gene-gene interaction network
Usage
cpp_random_walk(
ggi_src,
ggi_dest,
receptor_name,
tf_names,
n_walks = 10000L,
max_hop = 10L,
seed = 123L
)
Arguments
- ggi_src
Source gene names
- ggi_dest
Destination gene names
- receptor_name
Starting receptor name
- tf_names
TF names to score
- n_walks
Number of random walks
- max_hop
Maximum number of hops per walk
- seed
Random seed for reproducibility
Value
TF visit frequency scores