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Convert aliases to official gene symbols in a SingleCellExperiment Object

Source: R/pipeline_wrappers.R
alias_to_symbol_SCE.Rd

alias_to_symbol_SCEConvert aliases to official gene symbols in a SingleCellExperiment Object. Makes use of `nichenetr::convert_alias_to_symbols`

Usage

alias_to_symbol_SCE(sce, organism)

Arguments

sce

SingleCellExperiment object of the scRNAseq data of interest. Contains both sender and receiver cell types.

organism

Is sce data from "mouse" or "human"

Value

SingleCellExperiment Object

Examples

if (FALSE) { # \dontrun{
sce = sce %>% alias_to_symbol_SCE("human")
} # }