get_FDR_empirical_plots Get diagnostic plots of the empirical null.. This is the function that works under the hood of `get_FDR_empirical_plots_all`. Credits to Jeroen Gillis (cf satuRn package)
Usage
get_FDR_empirical_plots(de_output_tidy, cluster_id_oi, contrast_oi)
Arguments
- de_output_tidy
Data frame of DE results, containing at least the following columns: cluster_id, contrast, p_val, logFC.
- cluster_id_oi
Indicate which celltype DE results should be filtered for.
- contrast_oi
Indicate which contrast DE results should be filtered for.