Add a new data source to the model — add_new

add_new_datasource adds a new data source to one of the ligand-receptor, signaling and gene regulatory data sources.

Usage

add_new_datasource(new_source, network, new_weight,source_weights_df)

Arguments

new_source: A data frame / tibble containing novel interactions of the ligand-receptor, signaling or gene regulatory layer (required columns: from, to, source)
network: NULL or a data frame / tibble containing the base network to which you want to add the new data source (required columns: from, to, source)
new_weight: a weight value between 0 and 1 to assign to your new data source
source_weights_df: A data frame / tibble containing the weights associated to each already included individual data source (required columns: source, weight).

Value

A list containing 2 elements (network and source_weights_df): the updated network containing your data source and the updated source_weights_df containing the weight of the newly added data source.

Examples

if (FALSE) { # \dontrun{
## Update the lr_network with a new ligand-receptor data source
library(dplyr)
lr_toy <- tibble(from = "A", to = "B", source = "toy")
new_lr_network <- add_new_datasource(lr_toy, lr_network, 1, source_weights_df)
} # }