Draw a circos plot

Usage

make_circos_plot(vis_circos_obj, transparency = FALSE, args.circos.text = list(), ...)

Arguments

vis_circos_obj: Object returned by prepare_circos_visualization
transparency: Logical indicating whether the transparency of the links will correspond to the ligand-target potential score (default: FALSE)
args.circos.text: List of arguments to pass to circos.text (by default, the text size is set to 1)
...: Additional arguments to pass to chordDiagram

Value

A circos plot

Examples

if (FALSE) { # \dontrun{
# Default
make_circos_plot(vis_circos_obj, transparency = FALSE)

# Transparency
make_circos_plot(vis_circos_obj, transparency = TRUE)

# Make text smaller
make_circos_plot(vis_circos_obj, transparency = TRUE, args.circos.text = list(cex = 0.5))

# Don't sort links of each ligand based on widths (not recommended)
make_circos_plot(vis_circos_obj, transparency = TRUE, args.circos.text = list(cex = 0.5), link.sort = FALSE)
} # }