Add UCell scores to Seurat object (V4/V5 compatible)
Usage
.AddModuleScore_UCell(
obj,
features,
maxRank = 1500,
chunk.size = 100,
BPPARAM = NULL,
w_neg = 1,
assay = NULL,
slot = "data",
name = "_UCell"
)
Arguments
- obj
Seurat object
- features
List of signatures
- maxRank
Maximum rank
- chunk.size
Cells per chunk
- BPPARAM
BiocParallel param
- w_neg
Negative weight
- assay
Assay to use
- slot
Slot to use (V4) / layer (V5)
- name
Suffix for score names
Value
Seurat object with UCell scores