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Calculate UCell scores - main internal function

Source: R/utils.R
dot-calculate_Uscore.Rd

Calculate UCell scores - main internal function

Usage

.calculate_Uscore(
  matrix,
  features,
  maxRank = 1500,
  chunk.size = 100,
  BPPARAM = NULL,
  w_neg = 1,
  name = "_UCell"
)

Arguments

matrix

Expression matrix

features

List of signatures

maxRank

Maximum rank

chunk.size

Cells per chunk

BPPARAM

BiocParallel param

w_neg

Negative weight

name

Suffix for score names

Value

List with UCell scores