Interaction resources available in Omnipath

Names of the resources available in https://omnipathdb.org/interactions.

Usage

interaction_resources(dataset = NULL)

Arguments

dataset

a dataset within the interactions query type. Currently available datasets are `omnipath`, `kinaseextra`, `pathwayextra`, `ligrecextra`, `collectri`, `dorothea`, `tf_target`, `tf_mirna`, `mirnatarget`, `lncrna_mrna` and `small_molecule_protein`.

Value

Character: names of the interaction resources.

See also

• resources

• omnipath

• pathwayextra

• kinaseextra

• ligrecextra

• post_translational

• dorothea

• collectri

• tf_target

• transcriptional

• mirna_target

• tf_mirna

• small_molecule

• all_interactions

Examples

interaction_resources()