Identify Cell Type Specific Metabolites

Source: R/workflow.R

Find metabolites specifically produced or sensed by cell types

identifyCellTypeSpecificMetabolites(
  object,
  type = "production",
  specificity_threshold = 1.5
)

Arguments

object

scMetaLink object

type

Character. "production" or "sensing"

specificity_threshold

Numeric. Z-score threshold for specificity

Value

data.frame with cell type specific metabolites