Plot Spatial Communication Network

Visualize cell-cell communication with spatial context

plotSpatialCommunicationNetwork(
  object,
  metabolite = NULL,
  sender_type = NULL,
  receiver_type = NULL,
  top_n = 20,
  arrow_scale = 1,
  point_size = 5,
  show_labels = TRUE
)

Arguments

object

A scMetaLink object with spatial communication results

metabolite

Character. Metabolite to visualize (NULL for aggregate)

sender_type

Character. Sender cell type (NULL for all)

receiver_type

Character. Receiver cell type (NULL for all)

top_n

Integer. Number of top interactions to show arrows for

arrow_scale

Numeric. Scale factor for arrow thickness

point_size

Numeric. Size of cell type center points

show_labels

Logical. Show cell type labels

Value

A ggplot2 object