Bulk RNA-seq Expression Data for Cancer Cell Lines

TPM-normalized gene expression profiles for tumor cell lines from the Cell Model Passports database.

Usage

bulkdata

Format

A data frame with 37,004 genes (rows) and 1,387 cell lines (columns). Row names are gene symbols; column names are cell line identifiers.

Source

Cell Model Passports https://cellmodelpassports.sanger.ac.uk/downloads

References

van der Meer D, et al. (2019). Cell Model Passports - a curated and standardised dataset of pre-clinical cancer models. Nucleic Acids Research.