Package index
Main Interface
The primary interface for darwin. Use darwin() to create a new optimization object and access all functionality.
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darwin() - Create a Darwin Object
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Darwin-classDarwin - Darwin R6 Class for Multi-Objective Gene Selection
Objective Functions
Built-in objective functions for evaluating gene subsets. Lower correlation and condition numbers are better; higher distances are better.
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compute_correlation() - Compute Pairwise Correlation
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compute_distance() - Compute Pairwise Distance
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compute_condition() - Compute Condition Number
Genetic Algorithm
Low-level NSGA-II components. These are used internally but exposed for advanced users.
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nsga2_select() - NSGA-II Selection
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crowding_distance() - Compute Crowding Distance